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scrna-seq data generated by 10x genomics chromium system  (10X Genomics)

 
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    Structured Review

    10X Genomics scrna-seq data generated by 10x genomics chromium system
    Scrna Seq Data Generated By 10x Genomics Chromium System, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/chromium+scrna+seq+data/scrna+seq+10x+genomics+chromium+platform/pm39168979-75-10-14
    Average 90 stars, based on 1 article reviews
    scrna-seq data generated by 10x genomics chromium system - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    other:

    Article Title: Single-cell reconstruction with spatial context of migrating neural crest cells and their microenvironments during vertebrate head and neck formation.
    Article Snippet: Bioinformatics analysis Eight samples of 10X Genomics Chromium scRNA-seq data were sequenced on five Illumina HiSeq 2500 flowcells.

    Article Title: Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST.
    Article Snippet: For the mouse OB Slide-seqV2 data, we used 10X Genomics Chromium scRNA-seq data collected from the wild-type OB52.

    Article Title: Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST
    Article Snippet: For the mouse OB Slide-seqV2 data, we used 10X Genomics Chromium scRNA-seq data collected from the wild-type OB .

    Purification:

    Article Title: Single-cell transcriptomics of human T cells reveals tissue and activation signatures in health and disease
    Article Snippet: .. To assess the depletion of the tissue-associated T cell signature in other blood data sets relative to the tissue samples collected here, we obtained 10x Genomic Chromium scRNA-seq data from PBMCs of a healthy donor and purified T cells of a healthy donor from 10x Genomics (Donor C PBMCs: pbmc8k data set from https://support.10xgenomics.com/single-cell-gene-expression/datasets/2.1.0/pbmc8k ; Donor D purified T cells: t_4k data set from https://support.10xgenomics.com/single-cell-gene-expression/datasets/2.1.0/t_4k ). ..

    Software:

    Article Title: Single-cell transcriptome and metagenome profiling reveals the genetic basis of rumen functions and convergent developmental patterns in ruminants
    Article Snippet: The generated libraries were sequenced on an Illumina NovaSeq 6000 (Illumina), and paired-ended 150-bp (PE150) reads were produced for downstream analysis ( ). .. Chromium scRNA-seq data were processed for demultiplexing, alignment, and read counting following the set of 10x Genomics official analysis pipelines using CellRanger v4.0.0 software ( https://www.10xgenomics.com/ ) with default settings (see also ). ..



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